Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842778.1_cds_XP_016508505.1_21520
CDS Infomation

[gene=LOC107826075] [db_xref=GeneID:107826075] [protein=pyruvate decarboxylase 1 isoform X2] [protein_id=XP_016508505.1] [location=join(13353..13937,14322..14485,15010..15660,15760..15866,15970..16055)] [gbkey=CDS]
Sequence

ATGCTCTCACTCACAGAACAAAAAAACAAAAACAGAGTAATCAGCAAACCTTCATCATCA
CCTTCAATGGATTTCAAGGTCGGTGCAATCGACACGTGTAAACCTTTAAACAACGTAGTA
GCCAACTTACCAGCCCAAAACGCCGTTACAATCCAAACTTCCACCGTTCCGTTCAATTCC
CCAGACTCAACTCTAGGCCGTCACCTCGCACGCCGTTTAGTCCAAATCGGCGTCACCGAC
GTTTTCTCCGTTCCCGGCGACTTCAACTTAACACTTTTAGACCACCTCGTATCTGAACCT
GAACTTAACCTCGTAGGTTGTTGTAATGAACTTAATGCTGGTTATGCCGCTGACGGTTAT
GCTAGAGCACGTGGTGTGGGTGCGTGTGTTGTTACGTTTACTGTTGGGGGATTAAGTGTT
TTGAATGCTATAGCGGGTGCTTATAGTGAGAATTTACCGTTGATATGTATTGTTGGGGGA
CCTAATTCGAATGATTATGGAACCAACAGGATTTTACATCATACTATTGGGTTGCAGGAT
TTTAGTCAGGAGCTTCGTTGCTTTCAAACTGTCACTTGTTACCAGGCTGTGGTGAATAAT
TTAGAGGATGCACATGAACTGATTGACACTGCTGTATCTACAGCTTTGAAAGAGAGTAAG
CCGGTGTATATAAGCATAGGCTGTAATCTGCCGGGGATTCCACACCCTACTTTCAGTCGT
GAACCAGTTCCATTTGCCCTCTCTCCCAGACTGAGTAATATGATGGGTTTGGAAGCAGCA
GTGGAGGCAGCGGCTGAGTTCTTGAACAAAGCAGTAAAGCCAGTACTTGTTGGAGGGCCA
AAAATGCGGGTTGCAAAGGCATCTGATGCTTTTGTTGAGTTGTCTGATGCCTGTGGTTAT
GCTGTCGCAGTGATGCCATCTGCTAAAGGGTTGTTTCCCGAACACCATTCACATTTCATT
GGGACTTACTGGGGTGCAGTGAGCACAGCCTTCTGTGCTGAAATCGTGGAATCTGCTGAT
GCATACTTGTTTGCTGGACCTATTTTTAATGACTATAGCTCTGTTGGTTATTCTCTGCTT
CTCAAGAAAGAGAAAGCGATCATTGTCCAGCCTGATCGTGTGACTATTGGGAATGGACCA
GCGTTTGGTTGTGTTCTGATGAGGGATTTCCTTGCTGCATTAGCAAAGAGATTAAAGCAT
AATCCGACTGCTTTTGAGAATTACCATAGGATTTATGTTCCTGAGGGACATCCTCTTAAA
TGTGAGCCTAAGGAGGCATTAAGGGTTAATGTTCTATTTCAACACATTCAGAATATGTTG
TCTGGCGACAGTGCTGTGATTGCTGAGACGGGGGACTCGTGGTTCAATTGCCAGAAGCTG
AAATTGCCACAAGGATGTGGGTATGAGTTCCAAATGCAGTATGGATCCATCGGTTGGTCT
GTCGGTGCAACTCTTGGTTACGCACAAGCTGCACCTGAAAAGCGGGTGATTGCTTGCATC
GGTGACGGTGACTGCTCAGGATATTTCAACGATGCTGAGGTGTGGACAAAGAACCATTAT
CTTCTTGATAAACAATGGTGGCTACACAATTGA

Peptide Sequence

PEP ID

XP_016508505.1
PEP Infomation

PREDICTED: pyruvate decarboxylase 1 isoform X2 [Nicotiana tabacum]
Sequence

MLSLTEQKNKNRVISKPSSSPSMDFKVGAIDTCKPLNNVVANLPAQNAVTIQTSTVPFNS
PDSTLGRHLARRLVQIGVTDVFSVPGDFNLTLLDHLVSEPELNLVGCCNELNAGYAADGY
ARARGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLQD
FSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISIGCNLPGIPHPTFSR
EPVPFALSPRLSNMMGLEAAVEAAAEFLNKAVKPVLVGGPKMRVAKASDAFVELSDACGY
AVAVMPSAKGLFPEHHSHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLL
LKKEKAIIVQPDRVTIGNGPAFGCVLMRDFLAALAKRLKHNPTAFENYHRIYVPEGHPLK
CEPKEALRVNVLFQHIQNMLSGDSAVIAETGDSWFNCQKLKLPQGCGYEFQMQYGSIGWS
VGATLGYAQAAPEKRVIACIGDGDCSGYFNDAEVWTKNHYLLDKQWWLHN

Transcript Sequence

Gene sequence data has not been registered.